Lyle
J. Graham – Selected Publications
Articles
Chizhov,
A.V. and
Graham, L.J., A strategy for mapping biophysical to abstract neuronal
network models applied to primary visual cortex. bioRxiv
2021.04.28.441749, 2021
Schramm,
A., Marinazzo, D., Gener, T. and Graham, L.J., The Touch and Zap
method for in vivo whole-cell patch recording of intrinsic and visual
responses of cortical neurons and glial cells. PLoS ONE 9(5): e97310.
doi:10.1371/journal.pone.0097310, 2014
Chizhov,
A.V., Malinina, E., Druzin, M., Lyle J. Graham L.J. and Staffan
Johansson, S., Firing clamp: A novel method for single-trial
estimation of excitatory and inhibitory synaptic neuronal
conductances, Frontiers in Cellular Neuroscience, 8(00086), 2014
Hu,
H., Vervaeke, K., Graham, L. J. and Storm, J. F., Dual, complementary
theta resonance filtering in hippocampal pyramidal neurons, J.
Neuroscience 29(46):14472-14483, 2009
Ozer,
M., Uzuntarla, M., Perc, M., Graham, L.J., Spike latency and jitter
of neuronal membrane patches with stochastic Hodgkin-Huxley channels,
J. Theoretical Biology, 261(1): 83-92, 2009
Ozer,
M., Uzuntarla1, M., Kayikcioglu, T. and Graham, L. J., Collective
temporal coherence for subthreshold signal encoding on a stochastic
small-world Hodgkin-Huxley neuronal network. Physics Letters A 2008,
v372, no43, pp. 6498-6503
Chizhov,
A.V. Aand Graham, L.J., Efficient evaluation of neuron populations
receiving colored-noise current based on a refractory density method.
Physical
Review
E
77,
2008
Ozer,
M., Graham, L.J., Impact of network activity on noise delayed spiking
for a Hodgkin-Huxley model, European
Physical
Journal
B
v61:499-503,
2008
Ozer,
M., Graham, L.J., Erkaymaz, O., and Uzuntaria, M., Impact
of synaptic noise and conductance state on spontaneous cortical
firing, Neuroreport, 18(3):1371-74, 2007
Chizhov,
A.V., Graham, L.J., A population model of hippocampal pyramidal
neurons, linking a refractory density approach to conductance-based
neurons, Physical
Review
E
75,
011924, 2007
Chizhov,
A.V., Graham, L.J. and Turbin, A.A., Simulation of neural population
dynamics with a refractory density approach and a conductance-based
threshold neuron model, Neurocomputing, v70, No. 1-3. (December
2006), pp. 252-262.
Graham,
L.J., del Abajo, R., Gener, T. and Fernandez, E., A method of
combined single-cell electrophysiology and electroporation, J.
Neuroscience Methods, v160:69-74, 2007
Vervaeke,
K., Hu, H., Graham, L.J. and Storm, J.F., Contrasting effects of the
persistent Na+ current on neuronal excitability and spike timing,
Neuron, v37:663-680, 2006
Monier,
C., Chavane, F., Baudot, P., Graham, L.J., and Fregnac, Y.,
Orientation and direction selectivity of excitatory and inhibitory
inputs in visual cortical neurons: A diversity of combinations
produces spike tuning, Neuron, v37:663-680, 2003.
Fregnac,
Y., Monier, C., Chavane, F., Baudot, P., Graham, L.J., Shunting
inhibition, a silent step in visual cortical computation, J.
Physiology [Paris],
v97:441-451, 2003
Graham,
L., Décrivant les Circuits et les Mécanismes
sous-tendants le Calcul de la Direction dans la Rétine, Lettre
Neurologie, v7(1):16-17, 2003.
Ahnelt,
P., Ammermüller, J., Pelayo, F., Bongard, M., Palomar, D.,
Piedade, M., Ferrandez, J. M., Borg-Graham, L. and Fernandez, E.,
Neuroscientific basis for the design and development of a bioinspired
visual processing front-end. IFMBE Proceedings, 2002
Borg-Graham,
L., The computation of directional selectivity in the retina occurs
presynaptic to the ganglion cell, Nature Neuroscience
v4(2):176-183,
2001
Borst,
A., Direction selectivity in ganglion cells: Pre or post?, Nature
Neuroscience News and Views v4(2):119-120, 2001
Chavane,
F., Monier, C., Bringuier, V., Baudot, P., Borg-Graham, L.,
Lorenceau, J., and Fregnac, Y., The visual cortical association
field: A Gestalt concept or a psychophysiological entity?, J.
Physiology [Paris], v94(5-6):333-342, 2000.
Borg-Graham,
L., Additional efficient computation of branched nerve equations:
Adaptive time step and ideal voltage clamp, J. Computational
Neuroscience, v8(3):209-225, 2000
Shao,
Li-Rong, Halvorsrud, R., Borg-Graham, L., and Storm, J. F., The role
of BK-type Ca2+-dependent K+ channels in spike broadening during
repetitive firing in rat hippocampal pyramidal cells, J. Physiology,
v521.1:135-146, 1999
Borg-Graham,
L., Monier, C., and Fregnac, Y., Visual input evokes transient and
strong shunting inhibition in visual cortical neurons, Nature,
v389:369-373,1998
Gazeres,
N., Borg-Graham, L., and Fregnac, Y., A phenomenological model of
visually evoked spike trains in cat geniculate non-lagged X-cells,
Visual Neuroscience, v15:1157-1174,1998
Borg-Graham,
L., Monier, C., and Fregnac, Y., Voltage-clamp measurements of
visually-evoked conductances with whole-cell patch recordings in
primary visual cortex, J. Physiology [Paris], v90:185-188, 1996
Smith,
R. D., Grzywacz, N. M., and Borg-Graham, L., Is the input to a
GABAergic synapse the sole asymmetry in turtle's retinal directional
selectivity? Visual Neuroscience, v13:423-439, 1996
Commentary
Graham,
L., How not to get caught, News and Views, Nature Neuroscience,
v5(12):1256-57, 2002
Graham,
L., ModelDB, Neuroinformatics, and Computational Neuroscience,
Neuroinformatics, v1:141-144, 2002
Borg-Graham,
L., The slowly sleeping slab and slice, Current Biology,
v11:R140-R143, 2001
Borg-Graham,
L., Facilitating the science in computational neuroscience, Nature
Neuroscience
3
supp., page 1191, 2000
Borg-Graham,
L., Book review of Biophysics of computation: Information processing
in single neurons, by Christof Koch, Trends in Neurosciences,
v22(7):328-329, 1999
Book
Chapters
Graham,
L. J. and Schramm, A., In vivo dynamic clamp: The functional impact
of synaptic and intrinsic conductances in visual cortex. In Dynamic
Clamp: From Principles to Applications, ed. A. Destexhe and T. Bal,
Springer Press, 2009
Storm,
J., Vervaeke, K., Hu, J. and Graham, L. J., A dynamic clamp study of
the persistent sodium current in hippocampus. In Dynamic Clamp: From
Principles to Applications, ed. A. Destexhe and T. Bal, Springer
Press, 2009
Graham,
L., Modelling neuronal biophysics. In The Handbook for Brain Theory
and Neural Networks, 2nd edition pp164-170, ed. M. Arbib, MIT Press,
2002
Graham,
L. and Kado, R., The neuron's biophysical mosaic and its
computational relevance. In The Handbook for Brain Theory and Neural
Networks, 2nd edition pp170-175, ed. M. Arbib, MIT Press, 2002
Borg-Graham,
L., Monier, C., and Fregnac, Y., Now you see it, now you don't:
Shunting inhibition in early vision.In Vision: The Approach of
Biophysics and Neurosciences pp283-299, ed. C. Musio, World Scientiic
Publishing, 2001
Borg-Graham,
L., Interpretations of data and mechanisms for hippocampal pyramidal
cell models. In Cerebral Cortex Vol. 13 - Cortical Models, ed. E.
Jones, P. Ulinski and A. Peters, pp19-138, Plenum Publishing
Corporation, 1999
Borg-Graham,
L. and Grzywacz, N. M., A Model of the direction selectivity circuit
in retina: Transformations by neurons singly and in concert. In
Single Neuron Computation, edited by T. McKenna, J. Davis, and S. F.
Zornetzer, pp347-376. Academic Press, 1992
Borg-Graham,
L., Modelling the non-linear conductances of excitable membranes. In
Cellular Neurobiology: A Practical Approach, edited by Chad, J. and
Wheal, H. pp247-275. IRL Press at Oxford University Press, 1991
Technical
Reports
Borg-Graham,
L., On directional selectivity in vertebrate retina: An experimental
and computational study. PhD Thesis, Harvard-MIT Division of Health
Sciences and Technology, 1991 (Also appears as MIT AI Lab TR 1350)
Borg-Graham,
L., Modelling the somatic electrical behavior of hippocampal
pyramidal neurons. Master's Thesis, Department of Electrical
Engineering and Computer Science, Massachusetts Institute of
Technology, 1987 (Also appears as MIT AI Lab TR 1161)
Conference
Proceedings
Borg-Graham,
L., Modelling the electrical behavior of cortical neurons -
Simulations of hippocampal pyramidal cells, in Computer Simulation in
Brain Science, edited by R. M. J. Cotterill, pp384-404, Cambridge
University Press, 1987
Borg-Graham,
L., Simulations suggest information processing roles for the diverse
currents found in hippocampal neurons. Neural
Information
Processing
Systems
(Proceedings
of the Denver NIPS Conference), edited by D.Z. Anderson, pp82-94,
American Institute of Physics 1988
Miscellaneous
Parthasarathy,
H., From skepticism to acceptance, Nature, 31oct, 2002
Smaglick,
P., Brain Storm, Nature, 01nov, 2007
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